2004年获中国农业大学学士学位，2011年获美国宾夕法尼亚州立大学博士学位。2011至2014年分别在宾夕法尼亚州立大学、佐治亚大学从事博士后研究。2015年入选“国家青年人才计划”，同年被引进到中国科学院植物研究所工作。现任植物多样性与特色经济作物重点实验室副主任，兼任中国科学院大学岗位教授，中国植物学会理事、系统与进化植物学专业委员会委员，中国生物信息学学会（筹）农林信息学专业委员会委员，《Frontiers in Plant Science》期刊副主编，Journal of Systematics and Evolution、Plant Diversity、Biological Diversity、《植物学报》等期刊编委。曾获第三届“吴征镒植物学奖”之“青年创新奖”、中国科学院优秀导师、中国科学院大学“领雁银奖 振翅奖”。目前主要研究方向包括：1）多倍化与植物适应性进化；2）整合组学与植物新性状起源和多样化；3）基因组进化与植物重大进化事件。

主要研究方向： 

1）多倍化与植物适应性进化

多倍化事件在植物中频繁发生，鉴定植物进化过程中曾发生的多倍化事件，并将多倍化后的基因组、基因和调控网络等与重要性状关联，不仅可以阐明植物环境适应性的遗传基础，还可以进一步理解多倍化对物种形成和创新性状起源的重要贡献。

2）整合组学与植物新性状起源和多样化： 

在植物进化过程会逐渐产生一系列新性状，这些性状在不同类群或物种中的多样化，可以使它们拥有更强的环境适应能力。我们可以利用基因组、转录组、表观基因组和表型组等数据来挖掘新性状相关的基因组、基因家族和基因等层面的变化，并通过解析相关基因的功能而阐明新性状起源和多样化的分子机制。 

3） 基因组进化与植物重大进化事件： 

在植物进化过程中，发生过一系列的重大事件（例如：植物登陆，种子、花和果的起源等事件）。这些进化事件一直是植物进化研究领域的重大科学问题。 我们主要通过解析关键支系代表物种基因组图谱，揭示植物重大进化事件过程中基因组层面的变化，从而进一步理解基因组变异对植物进化的贡献。 

主持科研项目：

1. 中国科学院战略性先导科技专项（A类）子课题“特色观赏和药用植物的基因标识研究与关键物种的产地溯源”（2019-01至2023-12），主持，已结题；

2. 中国科学院战略性先导科技专项（B类）子课题“物种进化速率差异和染色体倍性进化对县级区域内生物多样性格局的意义”（2019-01至2023-07），主持，已结题；

3. 国家自然科学基金委员会面上项目“多倍化后小麦基因组和三维基因组结构变异及其进化意义的研究”（2019-01至2022-12），主持，已结题；

4. 国家重点研发计划课题“微藻物质能量代谢及其调控网络的解析与重构”（2021-11至2026-10），主持，在研；

5. 中国科学院青年交叉团队项目“植物多倍化及其在育种中的应用”（2023-01至2025-12），主持，在研；

6. 中科院基础研究领域青年团队“叶绿体内物质和能量的‘源’效提升”（2023-07至2028-07），课题负责人，在研；

7. 国家自然科学基金委创新研究群体“植物新性状起源和适应性进化”（2023-01至2027-12），项目骨干，在研。

研究论文（注 ^#为第一作者，*为通讯作者）： 

2024

55. Wu Jingjing, Zhang Linjing, Ma Xiaohui, Fu Xinxing, Chen Fei*, Jiao Yuannian*, Liu Jianquan*, Wu Shengdan*. 2024.The evolutionary significance of whole genome duplications in oil biosynthesis of oil crops. Horticulture Research 11(7):uhae156.

54. Barker MS, Jiao Yuannian, Glennon KL. 2024. Doubling down on polyploid discoveries: Global advances in genomics and ecological impacts of polyploidy. American Journal of Botany 20:e16395.

53. Liu Tengfei, Liu Haiyue, Xian Wenfei, Liu Zhi, Yuan Yaqin, Fan Jingwei, Xiang Shuaiying, Yang Xia, Liu Yucheng, Liu Shulin, Zhang Min, Shen Yanting, Jiao Yuannian, Cheng Shifeng, Doyle JJ, Xie Fang, Li Jiayang, Tian Zhixi. 2024. Duplication and sub-functionalization of flavonoid biosynthesis genes plays important role in Leguminosae root nodule symbiosis evolution. Journal of Integrative Plant Biology doi: 10.1111/jipb.13743.

2023

52. Li Kunpeng, Xu Peng, Wang Jinpeng, Yi Xin, Jiao Yuannian*. 2023. Identification of errors in draft genome assemblies at single-nucleotide resolution for quality assessment and improvement. Nature Communications 14(1):6556.

51. Wang Xiaoliang#, Ma Xuxu#, Yan Ge, Hua Lei, Liu Han, Huang Wei, Liang Zhikai, Chao Qing, M Hibberd Julian, Jiao Yuannian*, Zhang Mei*. 2023. Gene duplications facilitate C4-CAM compatibility in common purslane. Plant Physiology 193(4):2622-2639.

50. Yu Runxian, Chen Xudong, Long Lingjie, Jost Matthias, Zhao Ran, Liu Lumei, Mower Jeffrey P., W. dePamphilis Claude, Wanke Stefan, Jiao Yuannian*. 2023. De novo Assembly and Comparative Analyses of Mitochondrial Genomes in Piperales. Genome Biology and Evolution 15(3): evad041.

49. Li Zhongqiu, Hu Yiheng, Ma Xuelian, Da Lingling, She Jiajie, Liu Yun, Yi Xin, Cao Yaxin, Xu Wenying, Jiao Yuannian*, Su Zhen*. 2023. WheatCENet: A database for comparative co-expression networks analysis of allohexaploid wheat and its progenitors. Genomics, Proteomics & Bioinformatics 21(2):324-336.

48. Chen Hongyu, Guo Miaoxian, Dong Shuting, Wu Xinling, Zhang Guobin, He Liu, Jiao Yuannian, Chen Shilin, Li Li, Luo Hongmei. 2023. A chromosome-scale genome assembly of Artemisia argyi reveals unbiased subgenome evolution and key contributions of gene duplication to volatile terpenoid diversity. Plant Communications 4(3):100516.

47. Shen Fei#, Qin Yajuan#, Wang Rui#, Huang Xin, Wang Ying, Gao Tiangang, He Junna, Zhou Yue, Jiao Yuannian, Wei Jianhua, Li Lei, Yang Xiaozeng. 2023. Comparative genomics reveals a unique nitrogen-carbon balance system in Asteraceae. Nature Communications 14(1):4334.

46. Guo Xuelian#, Hu Xiaodi#, Li Jianwu, Shao Bingyi, Wang Yajun, Wang Long, Li Kui, Lin Dongliang, Wang Hanchen, Gao Zhiyuan, Jiao Yuannian, Wen Yingying, Ji Hongyu, Ma Chongbo, Ge Song, Jiang Wenkai, and Jin Xiaohua. 2023. The Sapria himalayana genome provides new insights into the lifestyle of endoparasitic plants. BMC Biology 21(1):134.

45. Chen Yongming, Guo Yiwen, Xie Xiaoming, Wang Zihao, Miao Lingfeng, Yang Zhengzhao, Jiao Yuannian, Xie Chaojie, Liu Jie, Hu Zhaorong, Xin Mingming, Yao Yingyin, Ni Zhongfu, Sun Qixin, Peng Huiru, and Guo Weilong. 2023. Pangenome-based trajectories of intracellular gene transfers in Poaceae unveil high cumulation in Triticeae. Plant Physiology 193(1):578-594.

44. Shen Liping, Liu Yangyang, Zhang Lili, Sun Zhiwen, Wang Ziying, Jiao Yuannian, Shen Kuocheng, Guo Zifeng. 2023. A transcriptional atlas identifies key regulators and networks for the development of spike tissues in barley. Cell Reports 42(11):113441.

43. Jia Jizeng, Zhao Guangyao, Li Danping, Wang Kai, Kong Chuizheng, Deng Pingchuan, Yan Xueqing, Zhang Xueyong, Lu Zefu, Xu Shujuan, Jiao Yuannian, Chong Kang, Liu Xu, Cui Dangqun, Li Guangwei, Zhang Yijing, Du Chunguang, Wu Liang, Li Tianbao, Yan Dong, Zhan Kehui, Chen Feng, Wang Zhiyong, Zhang Lichao, Kong Xiuying, Ru Zhengang, Wang Daowen, Gao Lifeng. 2023. Genome resources for the elite bread wheat cultivar Aikang 58 and mining of elite homeologous haplotypes for accelerating wheat improvement. Molecular Plant 16(12):1893-1910.

2022

42. Wang Xiaoliang#, Yan Xueqing#, Hu Yiheng#, Qin Liuyu, Wang Daowen*, Jia Jizeng* and Jiao Yuannian*. 2022. A recent burst of gene duplications in Triticeae. Plant Communications 3(2): 100268.

41. Wen Xiaohui#, Li Junzhuo#, Wang Lili#, Lu Chenfei, Gao Qiang, Xu Peng, Pu Ya, Zhang Qiuling, Hong Yan, Hong Luo, Huang He, Xin Huaigen, Wu Xiaoyun, Kang Dongru, Gao Kang, Li Yajun, Ma Chaofeng, Li Xuming, Zheng Hongkun, Wang Zicheng*, Jiao Yuannian*, Zhang Liangsheng*, Dai Silan*. 2022. The chrysanthemum lavandulifolium genome and the molecular mechanism underlying diverse capitulum types. Horticulture Research 9: uhab022.

40. Xiao Jun*, Liu Bao, Yao Yingyin, Guo Zifeng, Jia Haiyan, Kong Lingrang, Zhang Aimin, Ma Wujun, Ni Zhongfu, Xu Shengbao, Lu Fei, Jiao Yuannian, Yang Wuyun, Lin Xuelei, Sun Silong, Lu Zefu, Gao Lifeng, Zhao Guangyao, Cao Shuanghe, Chen Qian, Zhang Kunpu, Wang Mengcheng, Wang Meng, Hu Zhaorong, Guo Weilong, Li Guoqiang, Ma Xin, Li Junming, Han Fangpu, Fu Xiangdong, Ma Zhengqiang, Wang Daowen*, Zhang Xueyong*, Ling Hong-Qing*, Xia Guangmin*, Tong Yiping*, Liu Zhiyong*, He Zhonghu*, Jia Jizeng*, Chong Kang*. 2022. Wheat genomic study for genetic improvement of traits in China. Science China-Life Sciences 65(9): 1718-1775.

39. Shen Yanting*, Li Wanying, Zeng Ying, Li Zhipeng, Chen Yiqiong, Zhang Jixiang, Zhao Hong, Feng Lingfang, Ma Dongming, Mo Xiaolu, Ouyang Puyue, Huang Lili, Wang Zheng, Jiao Yuannian, Wang Hongbin*. 2022. Chromosome-level and haplotype-resolved genome provides insight into the tetraploid hybrid origin of patchouli. NatureCommunications 13(1): 3511.

38. Shu Jiangping, Wang Hao, Shen Hui, Wang Ruijiang, Fu Qiang, Wang Yongdong, Jiao Yuannian, Yan Yuehong*. 2022. Phylogenomic Analysis Reconstructed the Order Matoniales from Paleopolyploidy Veil. Plants (Basel) 11(12): 1529.

37. Liu Yang#*, Wang Sibo#, Li Linzhou#, Yang Ting#, Dong Shanshan#, Wei Tong#, Wu Shengdan#, Liu Yongbo#, Gong Yiqing, Feng Xiuyan, Ma Jianchao, Chang Guanxiao, Huang Jinling, Yang Yong, Wang Hongli, Liu Min, Xu Yan, Liang Hongping, Yu Jin, Cai Yuqing, Zhang Zhaowu, Fan Yannan, Mu Weixue, Sahu Sunil Kumar, Liu Shuchun, Lang Xiaoan, Yang Leilei, Li Na, Habib Sadaf, Yang Yongqiong, Lindstrom Anders J, Liang Pei, Goffinet Bernard, Zaman Sumaira, Wegrzyn Jill L, Li Dexiang, Liu Jian, Cui Jie, Sonnenschein Eva C, Wang Xiaobo, Ruan Jue, Xue Jia-Yu, Shao Zhu-Qing, Song Chi, Fan Guangyi, Li Zhen, Zhang Liangsheng, Liu Jianquan, Liu Zhong-Jian, Jiao Yuannian, Wang Xiao-Quan, Wu Hong, Wang Ertao, Lisby Michael, Yang Huanming, Wang Jian, Liu Xin, Xu Xun, Li Nan, Soltis Pamela S, Van de Peer Yves*, Soltis Douglas E*, Gong Xun*, Liu Huan*, Zhang Shouzhou*. 2022. The Cycas genome and the early evolution of seed plants. Nature Plants 8(4): 389-401.

36. Jiang Yan, Hu Xiaodi, Yuan Yuan, Guo Xuelian, Chase Mark W, Ge Song, Li Jianwu, Fu Jinlong, Li Kui, Hao Meng, Wang Yiming, Jiao Yuannian, Jiang Wenkai, and Jin Xiaohua*. 2022. The Gastrodia menghaiensis (Orchidaceae) genome provides new insights of orchid mycorrhizal interactions.BMC Plant Biology 22: 179.

35. Li Hao#, Nie Fang#, Zhu Lele#, Mu Menghua, Fan Ruixiao, Li Jingyao, Shaheen Aaqib, Liu Yifan, Li Can, Liu Wenjuan, Liang Huihui, Zhao Xinpeng, Bai Shenglong, Guo Guanghui, Li Zheng, Hu Yiheng, Jiao Yuannian, Adams Jonathan, Distelfeld Assaf, Sun Guiling, Li Suoping, Zhou Yun*, Song Chunpeng*. 2022. New insights into the dispersion history and adaptive evolution of taxon Aegilops tauschii in China. Journal of Genetics and Genomics 49(3): 185-194.

34. Li Lingfei#, Chen Xiaoli#, Fang Dongming#, Dong Shanshan#, Guo Xing#, Li Na#, Dominguez Lucia Campos, Wang Wenguang, Liu Yang, Lang Xiaoan, Peng Yang, Tian Daike, Thomas Daniel C, Mu Weixue, Liu Min, Wu Chenyu, Yang Ting, Zhang Suzhou, Yang Leilei, Yang Jianfen, Liu Zhongjian, Zhang Liangsheng, Zhang Xingtan, Chen Fei, Jiao Yuannian, Guo Yalong, Hughes Mark, Wang Wei, Liu Xiaofei, Zhong Chunmei, Li Airong, Sahu Sunil Kumar, Yang Huanming, Wu Ernest, Sharbrough Joel, Lisby Michael, Liu Xin, Xu Xun, Soltis Douglas E, Van de Peer Yves, Kidner Catherine, Zhang Shouzhou*, Liu Huan*. 2022. Genomes shed light on the evolution of Begonia, a mega-diverse genus. New Phytologist234(1): 295–310.

2021

33. Qin Liuyu#, Hu Yiheng#, Wang Jinpeng#, Wang Xiaoliang#, Zhao Ran#, Shan Hongyan, Li Kunpeng, Xu Peng, Wu Hanying, Yan Xueqing, Liu Lumei, Yi Xin, Wanke Stefan, Bowers John E, Leebens-Mack James H, dePamphilis Claude W, Soltis Pamela S, Soltis Douglas E, Kong Hongzhi, Jiao Yuannian*. 2021. Insights into angiosperm evolution, floral development and chemical biosynthesis from the Aristolochia fimbriata genome. Nature Plants 7(9): 1239-1253.

32. Lu Jiangjie#, Luo Meifang#, Wang Li#, Li Kunpeng#, Yu Yongyi, Yang Weifei, Gong Pichang, Gao Huihui, Li Qiaoru, Zhao Jing, Wu Lanfeng, Zhang Mingshu, Liu Xueyang, Zhang Xuemei, Zhang Xian, Kang Jieyu, Yu Tongyuan, Li Zhimin, Jiao Yuannian*, Wang Huizhong*, He Chaoying*. 2021. The Physalis floridana genome provides insights into the biochemical and morphological evolution of Physalis fruits. Horticulture Research 8: 244.

31. Yu Tao#, Hu Yiheng#, Zhang Yuyang, Zhao Ran, Yan Xueqing, Dayananda Buddhi, Wang Jinpeng, Jiao Yuannian, Li Junqing*, Yi Xin*. 2021. Whole-Genome Sequencing of Acer catalpifolium Reveals Evolutionary History of Endangered Species. Genome Biology and Evolution 13(12): evab271.

2020

30. Wu Shengdan, Han Baocai, Jiao Yuannian*. 2020. Genetic contribution of paleopolyploidy to adaptive evolution in angiosperms. Molecular Plant 13(1): 59-71.

29. Zhang Xiaoxia, Li Xiaoxia, Zhao Ran, Zhou Yun, Jiao Yuannian*. 2020. Evolutionary strategies drive a balance of the interacting gene products for the CBL and CIPK gene families. New Phytologist 226(5): 1506-1516.

28. Liu Pingli#, Zhang Xi#, Mao Jianfeng#, Hong Yanming#, Zhang Rengang, Yilan E., Nie Shuai, Jia Kaihua, Jiang Chenkun, He Jian, Shen Weiwei, He Qizouhong, Zheng Wenqing, Abbas Samar, Jewaria Pawan Kumar, Tian Xuechan, Liu Changjun, Jiang Xiaomei, Yin Yafang, Liu Bo, Wang Li, Jin Biao, Ma Yongpeng, Qiu Zongbo, Baluska Frantisek, Samaj Jozef, He Xinqiang, Niu Shihui, Xie Jianbo, Xie Lei, Xu Huimin, Kong Hongzhi, Ge Song, Dixon Richard A., Jiao Yuannian*, Lin Jinxin*. 2020. The Tetracentron genome provides insight into the early evolution of eudicots and the formation of vessel elements. Genome Biology 21(1): 291.

27. Xie Jinghe#, Zhao Haifeng#, Li Kunpeng#, Zhang Rui, Jiang Yongchao, Wang Meimei, Guo Xuelian, Yu Ben, Kong Hongzhi*, Jiao Yuannian*, Xu Guixia*. 2020. A chromosome-scale reference genome of Aquilegia oxysepala var. kansuensis. Horticulture Research 7(1): 113.

26. Zhang Liangsheng#*, Wu Shengdan#, Chang Xiaojun, Wang Xiuyun, Zhao Yunpeng, Xia Yiping, Trigiano Robert N., Jiao Yuannian*, Chen Fei*. 2020. The ancient wave of polyploidization events in flowering plants and their facilitated adaptation to environmental stress. Plant Cell and Environment 43(12): 2847-2856.

25. Ali Roshan*, Jiao Yuannian, Kerr Wall P, Patching Simon G*, Ahmad Irshad, Lutfulla Ghosia, dePamphilis Claude W. 2020. In silico identification and structure function analysis of a putative coclaurine N-methyltransferase from Aristolochia fimbriata. Computational Biology and Chemistry 85: 107201.

24. Chen Yongming, Song Wanjun, Xie Xiaoming, Wang Zihao, Guan Panfeng, Peng Huiru, Jiao Yuannian, Ni Zhongfu, Sun Qixin, Guo Weilong*. 2020. A Collinearity-Incorporating Homology Inference Strategy for Connecting Emerging Assemblies in the Triticeae Tribe as a Pilot Practice in the Plant Pangenomic Era. Molecular Plant 13(12): 1694-1708.

23. Liu Jin#, Shi Cong#, Shi Chengcheng#, Li Wei#, Zhang Qunjie#, Zhang Yun, Li Kui, Lu Huifang, Shi Chao, Zhu Sitao, Xiao Zaiyun, Nan Hong, Yue Yao, Zhu Xunge, Wu Yu, Hong Xiaoning, Fan Guangyi, Tong Yan, Zhang Dan, Mao Changli, Liu Yunlong, Hao Shijie, Liu Weiqing, Lv Meiqi, Zhang Haibin, Liu Yuan, Hu-tang Ge-Ran, Wang Jinpeng, Wang Jiahao, Sun Yinghuai, Ni Shubang, Chen Wenbin, Zhang Xingcai, Jiao Yuannian, Eichler Evan, Li Guohua, Liu Xin*, Gao Lizhi*. 2020. The chromosome-based rubber tree genome provides new insights into spurge genome evolution and rubber biosynthesis. Molecular Plant 13(2): 336-350.

22. Zhang Jian#, Fu Xinxing#, Li Ruiqi#, Zhao Xiang#, Liu Yang#, Li Minghe#, Zwaenepoel Arthur#, Ma Hong, Goffinet Bernard, Guan Yanlong, Xue Jiayu, Liao Yiying, Wang Qingfeng, Wang Qinghua, Wang Jieyu, Zhang Guoqiang, Wang Zhiwen, Jia Yu, Wang Meizhi, Dong Shanshan, Yang Jianfen, Jiao Yuannian, Guo Yalong, Kong Hongzhi, Lu Anming, Yang Huanming, Zhang Shouzhou*, Van de Peer Yves*, Liu Zhongjian*, Chen Zhiduan*. 2020. The hornwort genome and early land plant evolution. Nature Plants 6: 107-118.

21. Zhang Liangsheng*#, Chen Fei#, Zhang Xingtan#, Li Zhen#, Zhao Yiyong#, Lohaus Rolf#, Chang Xiaojun#, Dong Wei, Ho Simon Yw, Liu Xing, Song Aixia, Chen Junhao, Guo Wenlei, Wang Zhengjia, Zhuang Yingyu, Wang Haifeng, Chen Xuequn, Hu Juan, Liu Yanhui, Qin Yuan, Wang Kai, Dong Shanshan, Liu Yang, Zhang Shouzhou, Yu Xianxian, Wu Qian, Wang Liangsheng, Yan Xueqing, Jiao Yuannian, Kong Hongzhi, Zhou Xiaofan, Yu Cuiwei, Chen Yuchu, Li Fan, Wang Jihua, Chen Wei, Chen Xinlu, Jia Qidong, Zhang Chi, Jiang Yifan, Zhang Wanbo, Liu Guanhua, Fu Jianyu, Chen Feng, Ma Hong, Van de Peer Yves, Tang Haibao. 2020. The water lily genome and the early evolution of flowering plants. Nature 577(7788): 79-84.

2019

20. Guo Hui#, Jiao Yuannian#, Tan Xu, Wang Xiyin, Huang Xianzhong, Jin Huizhe, Paterson Andrew H.*. 2019. Gene duplication and genetic innovation in cereal genomes. Genome Research 29(2): 261-269.

19. Yoshida Satoko, Kim Seungill, Wafula Eric, Tanskanen Jaakko, Kim Yong-Min, Honaas Loren, Yang Zhenzhen, Spallek Thomas, Conn Caitlin, Ichihashi Yasunori, Cheong Kyeongchae, Cui Songkui, Der Joshua, Gundlach Heidrun, Jiao Yuannian, Hori Chiaki, Ishida Juliane K., Kasahara Hiroyuki, Kiba Takatoshi, Kim Myung-Shin, Koo Namjin, Laohavisit Anuphon, Lee Yong-Hwan, Lumba Shelley, McCourt Peter, Mortimer Jenny, Mutuku Musembi, Nomura Takahito, Yuko Sasaki-Sekimoto, Seto Yoshiya, Wang Yu, Wakatake Takanori, Sakakibara Hitoshi, Demura Taku, Yamaguchi Shinjiro, Yoneyama Koichi, Manabe Ri-ichiroh, Nelson David C., Schulman Alan, Timko Michael, dePamphilis Claude., Choi Doil, Ken Shirasu*. 2019. Genome sequence of Striga asiatica provides insight into the evolution of plant parasitism. Current Biology 29(18): 3041-3052. e3044.

2018

18. Rusch Michael#, Nakitandwe Joy#, Shurtleff Sheila#, Newman Scott#, Zhang Zhaojie, Edmonson Michael, Parker Matthew, Jiao Yuannian, Ma Xiaotu, Liu Yanling, Gu Jiali, Walsh Michael, Becksfort Jared, Thrasher Andrew, Li Yongjin, Mcmurry James, Hedlund Erin, Patel Aman, Easton John, Yergeau Donald, Vadodaria Bhavin, Tatevossian Ruth G, Raimondi Susana, Hedges Dale, Chen Xiang, Hagiwara Kohei, Mcgee Rose, Robinson Giles, Klco Jeffery, Gruber Tanja, Ellison David *, Downing James*, Zhang Jinghui*. 2018. Clinical cancer genomic profiling by three-platform sequencing of whole genome, whole exome and transcriptome. Nature Communications 9(1): 3962.

17. Jiao Yuannian*. 2018. Double the genome, double the fun: Genome duplications in angiosperms, Molecular Plant 11(3): 357-358.

16. Hu Yiheng#, Zhao Ran#, Xu Peng, Jiao Yuannian*. 2018. The genome of opium poppy reveals evolutionary history of morphinan pathway. Genomics Proteomics & Bioinformatics 16(6):460-462.

2017

15. Zhao Guangyao, Zou Cheng, Li Kui, Wang Kai, Li Tianbao, Gao Lifeng, Zhang Xiaoxia, Wang Hongjin, Yang Zujun, Liu Xu, Jiang Wenkai*, Mao Long*, Kong Xiuying*, Jiao Yuannian*, Jia Jizeng*. 2017. The Aegilops tauschii genome reveals multiple impacts of transposons. Nature Plants 3(12): 946-955.

2015及以前 

14. Pu Juan#, Wang Shuoguo#, Yin Yanbo#, Zhang Guozhong, Carter Robert A, Wang Jinliang, Xu Guanlong, Sun Honglei, Wang Min, Wen Chu, Wei Yandi, Wang Dongdong, Zhu Baoli, Lemmon Gordon, Jiao Yuannian, Duan Susu, Wang Qian, Du Qian, Sun Meng, Bao Jinnan, Sun Yipeng, Zhao Jixun, Zhang Hui, Wu Gang, Liu Jinhua, Webster Robert G*. 2015. Evolution of the H9N2 influenza genotype that facilitated the genesis of the novel H7N9 virus. Proc Natl Acad Sci U S A. 112(2): 548-53. 

13. Jiao Yuannian#, Li Jingping#, Tang Haibao#, Paterson Andrew H*. 2014. Integrated Syntenic and Phylogenomic Analyses Reveal an Ancient Genome Duplication in Monocots. Plant Cell26(7): 2792-802.

12. Jiao Yuannian and Paterson Andrew H*. 2014. Polyploidy-associated genome modifications during land plant evolution. Philosophical Transactions of the Royal Society B 369(1648).

11. Jiao Yuannian* and Guo Hui. 2014. Prehistory of the angiosperms: characterization of the ancient genomes. Advances in Botanical Research, Volume 69, ISSN 0065-2296.

10. Amborella Genome Project. 2013. The Amborella genome and the evolution of flowering plants. Science342 (6165) DOI: 10.1126/science.1241089 (Major contributor for Global Gene Family Analysis).

9. Ming Ray#*, VanBuren Robert#, Liu Yanling#, Yang Mei#, Han Yuepeng, Li Leiting, Zhang Qiong, Kim Min-Jeong, Schatz Michael C, Campbell Michael, Li Jingping, Bowers John E, Tang Haibao, Lyons Eric, Ferguson Ann A, Narzisi Giuseppe, Nelson David R, Blaby-Haas Crysten E, Gschwend Andrea R, JiaoYuannian, Der Joshua P, Zeng Fanchang, Han Jennifer, Min Xiangjia, Hudson Karen A, Singh Ratnesh, Grennan Aleel K, Karpowicz Steven J, Watling Jennifer R, Ito Kikukatsu et al.2013. Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.). Genome Biology 14: R41.

8. Bliss Barbara J#*, Wanke Stefan#, Barakat Abdelali, Ayyampalayam Saravanaraj, Wickett Norman, Wall P Kerr, Jiao Yuannian, Landherr Lena, Ralph Paula E, Hu Yi, Neinhuis Christoph, Leebens-Mack Jim, Arumuganathan Kathiravetpilla, Clifton Sandra W, Maximova Siela N, Ma Hong and dePamphilis Claude W*. 2013. Characterization of the basal angiosperm Aristolochia fimbriata: a potential experimental system for genetic studies. BMC Plant Biology 13(1): 13.

7. Zhang Yeting, Fernandez-Aparicio Monica, Wafula Eric K, Das Malay, Jiao Yuannian, Wickett Norman J, Honaas Loren A, Ralph Paula E, Wojciechowski Martin F, Timko Michael P, Yoder John I, Westwood James H and dePamphilis Claude W*. 2013. Evolution of a horizontally acquired legume gene, albumin 1, in the parasitic plant Phelipanche aegyptiaca and related species. BMC Evolutionary Biology 13: 48.

6. Jiao Yuannian, Leebens-Mack Jim, Ayyampalayam Saravanaraj, Bowers John, McKain Michael, McNeal Joel, Rolf Megan, Ruzicka Daniel, Wafula Eric, Wickett Norman, Wu Xiaolei, Zhang Yong, Wang Jun, Zhang Yeting, Carpenter Eric, Deyholos Micheal, Kutchan Toni, Chanderbali Andre, Soltis Pamela, Stevenson Dennis, McCombie Richard, Pires Chris, Wong Gane KA-SHU, Soltis Douglas, dePamphilis Claude*. 2012. A genome triplication associated with early diversification of the core eudicots. Genome Biology 13(1): R3.

5. Adams Joshua, Adeli Ardeshir, Hsu Chuan-Yu, Harkess Richard, PAGE Grier, dePamphilis Claude, Jiao Yuannian, Schultz Emily, Yüceer Cetin*. 2012.Characterization of Poplar ZIP Family Members ZIP1.2 and ZNT1. Journal of Plant Genetics and Transgenics 3(1): 1-13.

4. Jiao Yuannian, Wickett Norman J, Ayyampalayam Saravanaraj, Chanderbali André S, Landherr Lena, Ralph Paula E, Tomsho Lynn P, Hu Yi, Liang Haiying, Soltis Pamela S, Soltis Douglas E, Clifton Sandra W, Schlarbaum Scott E, Schuster Stephan C, Ma Hong, Leebens-Mack Jim, dePamphilis Claude W*. 2011. Ancestral polyploidy in seed plants and angiosperms. Nature 473(7345): 97-100.

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